Bug when running cellranger reanalyze with barcodes option
When running cellranger reanalyze with barcodes option to analyze a subset of cells, I encountered following error message:
IndexError: index 29870 is out of bounds for axis 0 with size 29869
29869 is the number of barcodes I want to analyze.
After googling for a while, I guess it's because of array index, so is this a bug in the current version of cell ranger(version 2.1.0)?
Edited：Finally I figured it out. Since cellranger reanalyze with genes options can only give the differential analysis results of these genes, I once modified the code to report all differential expressed genes, which introduced bugs in the original code. Sorry for that, this post can be closed.